BMRB Entry 5590

Title:
1H, 13C and 15N resonance assignments of rice telomere binding domain from Oryza sativa
Deposition date:
2002-11-15
Original release date:
2003-11-24
Authors:
Ko, Sung-gun
Citation:

Citation: Ko, Sung-gun; Shin, Joon; Yu, Eun; Chung, In; Tanaka, Toshiyuki; Lee, Weontae. "Letter to the Editor: 1H, 13C and 15N Resonance Assignments of Rice Telomere Binding Domain from Oryza sativa"  J. Biomol. NMR 27, 89-90 (2003).
PubMed: 12878845

Assembly members:

Assembly members:
Telomere binding protein-1, polymer, 120 residues, 13729.68 Da.

Natural source:

Natural source:   Common Name: Rice   Taxonomy ID: 4530   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Oryza sativa

Experimental source:

Experimental source:   Production method: recombinant technology

Data sets:
Data typeCount
13C chemical shifts425
15N chemical shifts115
1H chemical shifts527

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1DNA-binding domain in RTBP11

Entities:

Entity 1, DNA-binding domain in RTBP1 120 residues - 13729.68 Da.

1   PHEPROPHEALAASPPROASNSERLEUALA
2   LEUALAASNVALPROLEUSERARGSERLYS
3   ARGPROASPPHEGLYGLNARGARGILEARG
4   ARGPROPHETHRVALALAGLUVALGLULEU
5   LEUVALGLUALAVALGLUHISLEUGLYTHR
6   GLYARGTRPARGASPVALLYSPHEARGALA
7   PHEGLUASNVALHISHISARGTHRTYRVAL
8   ASPLEULYSASPLYSTRPLYSTHRLEUVAL
9   HISTHRALASERILEALAPROGLNGLNARG
10   ARGGLYALAPROVALPROGLNGLULEULEU
11   ASPARGVALLEUALAALAGLNALATYRTRP
12   SERVALASPSERSERGLYARGILEVALTHR

Samples:

sample_1: Telomere binding protein-1, [U-100% 15N], 1 mM

sample_2: Telomere binding protein-1, [U-100% 13C; U-100% 15N], 1 mM

Ex-cond_1: pH: 7.0; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
15N-NOESY HSQCnot availablenot availablenot available
HNCAnot availablenot availablenot available
HNCACBnot availablenot availablenot available
CBCACONHnot availablenot availablenot available
HNCOnot availablenot availablenot available
15N-edited NOESYnot availablenot availablenot available
15N-edited TOCSYnot availablenot availablenot available
13C-edited NOESYnot availablenot availablenot available
HCCH-TOCSYnot availablenot availablenot available

Software:

SPARKY v2.0 -

NMR spectrometers:

  • Bruker DRX 500 MHz
  • Bruker DRX 800 MHz
  • Varian INOVA 500 MHz

Related Database Links:

BMRB 11038
PDB
GB AAF97508 EAY88030 EAZ25089
SP Q9LL45
AlphaFold Q9LL45

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks