BMRB Entry 5507

Title:
Native State Hydrogen Exchange Study of Suppressor and Pathogenic Variants of Transthyretin
Deposition date:
2002-08-25
Original release date:
2003-01-27
Authors:
Liu, Kai; Kelly, Jeffery; Wemmer, David
Citation:

Citation: Liu, Kai; Kelly, Jeffery; Wemmer, David. "Native State Hydrogen Exchange Study of Suppressor and Pathogenic Variants of Transthyretin"  J. Mol. Biol. 320, 821-832 (2002).
PubMed: 12095258

Assembly members:

Assembly members:
Transthyretin, polymer, 128 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology

Data sets:
  • assigned_chemical_shifts
Data typeCount
13C chemical shifts128
15N chemical shifts121
1H chemical shifts121

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1TTR subunit 11
2TTR subunit 21
3TTR subunit 31
4TTR subunit 41

Entities:

Entity 1, TTR subunit 1 128 residues - Formula weight is not available

1   METGLYPROTHRGLYTHRGLYGLUSERLYS
2   CYSPROLEUMETVALLYSVALLEUASPALA
3   VALARGGLYSERPROALAILEASNVALALA
4   VALHISVALPHEARGLYSALAALAASPASP
5   THRTRPGLUPROPHEALASERGLYLYSTHR
6   SERGLUSERGLYGLULEUHISGLYLEUTHR
7   THRGLUGLUGLUPHEVALGLUGLYILETYR
8   LYSVALGLUILEASPTHRLYSSERTYRTRP
9   LYSALALEUGLYILESERPROPHEHISGLU
10   HISALAGLUVALVALPHETHRALAASNASP
11   SERGLYPROARGARGTYRTHRILEALAALA
12   LEULEUSERPROTYRSERTYRSERTHRTHR
13   ALAVALVALTHRASNPROLYSGLU

Samples:

sample_1: Transthyretin0.3 – 1.2 mM

Native_State: pH: 5.75; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
HSQCnot availablenot availablenot available
HNCAnot availablenot availablenot available
HNCACBnot availablenot availablenot available
1H-15N NOESYnot availablenot availablenot available

Software:

XEASY v2.1 - data processing, peak assignments

NMR spectrometers:

  • unknown unknown 0 MHz

Related Database Links:

BMRB 2476 5508 5509 5510
PDB
DBJ BAA00059 BAF62350 BAG34987
EMBL CAA42087 CAG33189
GB AAA60011 AAA60012 AAA60013 AAA60018 AAA61181
PRF 0908191A 1008142A 1101213A 1709210A
REF NP_000362 NP_001009137 XP_003830303
SP P02766 Q5U7I5
AlphaFold P02766 Q5U7I5

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks