BMRB Entry 4866

Title:
Backbone Resonance Assignment of Human UBC4
Deposition date:
2000-10-18
Original release date:
2000-12-18
Authors:
Farrow, Neil; Archer, Sharon; Wu, Zhongren; Camac, Daniel; Parsons, Tom; Rolfe, Mark; Domaille, Peter
Citation:

Citation: Farrow, Neil; Archer, Sharon; Wu, Zhongren; Camac, Daniel; Parsons, Tom; Rolfe, Mark; Domaille, Peter. "Letter to the Editor: Backbone resonance assignment of human UBC4"  J. Biomol. NMR 18, 363-364 (2000).

Assembly members:

Assembly members:
ubiquition conjugating enzyme 4, polymer, 147 residues, 16735.3 Da.

Natural source:

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology

Data sets:
Data typeCount
1H chemical shifts128
13C chemical shifts244
15N chemical shifts128

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1ubc41

Entities:

Entity 1, ubc4 147 residues - 16735.3 Da.

1   METALALEULYSARGILEHISLYSGLULEU
2   ASNASPLEUALAARGASPPROPROALAGLN
3   CYSSERALAGLYPROVALGLYASPASPMET
4   PHEHISTRPGLNALATHRILEMETGLYPRO
5   ASNASPSERPROTYRGLNGLYGLYVALPHE
6   PHELEUTHRILEHISPHEPROTHRASPTYR
7   PROPHELYSPROPROLYSVALALAPHETHR
8   THRARGILETYRHISPROASNILEASNSER
9   ASNGLYSERILECYSLEUASPILELEUARG
10   SERGLNTRPSERPROALALEUTHRILESER
11   LYSVALLEULEUSERILECYSSERLEULEU
12   CYSASPPROASNPROASPASPPROLEUVAL
13   PROGLUILEALAARGILETYRLYSTHRASP
14   ARGGLULYSTYRASNARGILEALAARGGLU
15   TRPTHRGLNLYSTYRALAMET

Samples:

sample_1: ubiquition conjugating enzyme 4, [U-13C; U-15N], mM

ex-cond_1: pH: 6.0; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
1H-15N-HSQCnot availablenot availablenot available
HNCACBnot availablenot availablenot available
CBCACONHnot availablenot availablenot available
CC-TOCSYnot availablenot availablenot available

Software:

nmrPipe - data processing

PIPP - data analysis, visualization

NMRView - data analysis, visualization

NMR spectrometers:

  • Bruker AMX 600 MHz

Related Database Links:

BMRB 6277
PDB
DBJ BAA87330 BAB23116 BAC28070 BAC33981 BAC36940
EMBL CAG31534 CAH93209 CAJ81618 CDQ70075 CDQ72611
GB AAA85100 AAA85101 AAA85102 AAA91460 AAA91461
PRF 2111484A
REF NP_001016064 NP_001026324 NP_001032369 NP_001039961 NP_001072141
SP P61077 P61078 P61079 P62837 P62838
TPG DAA27344
AlphaFold P62838 P61077 P61078 P61079 P62837

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks