BMRB Entry 4829

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PDB ID: 1jxs
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4829
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 15N and 13C resonance assignments for the DNA-binding domain of interleukin enhancer binding factor

Deposition date:

2000-09-14

Original release date:

2002-11-14

Authors:

Liu, Pei-Phen; Chen, Y.C.; Li, Chin; Hsieh, Yu-Huei; Chen, Shu-Wan; Chen, Shu-Huei; Jeng, W.Y.; Chuang, Woei-Jer

Citation:

Citation: Liu, Pei-Phen; Chen, Y.C.; Li, Chin; Hsieh, Yu-Huei; Chen, Shu-Wan; Chen, Shu-Huei; Jeng, W.Y.; Chuang, Woei-Jer. "Solution structure of the DNA-binding domain of interleukin enhancer binding factor 1 (FOXK1a)" Proteins: Struct., Funct., Genet. 49, 543-553 (2002).
PubMed: 12402362

Assembly members:

Assembly members:
Interleukin enhancer binding factor, polymer, 98 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: DE3

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Interleukin enhancer binding factor: DSKPPYSYAQLIVQAITMAP DKQLTLNGIYTHITKNYPYY RTADKGWQNSIRHNLSLNRY FIKVPRSQEEPGKGSFWRID PASESKLIEQAFRKRRPR

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
1H chemical shifts	612
13C chemical shifts	298
15N chemical shifts	105

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	ILF	1

Entities:

Entity 1, ILF 98 residues - Formula weight is not available

1

ASP

SER

LYS

PRO

TYR

SER

TYR

ALA

GLN

2

LEU

ILE

VAL

GLN

ALA

ILE

THR

MET

ALA

PRO

3

ASP

LYS

GLN

LEU

THR

LEU

ASN

GLY

ILE

TYR

4

THR

HIS

ILE

THR

LYS

ASN

TYR

PRO

TYR

5

ARG

THR

ALA

ASP

LYS

GLY

TRP

GLN

ASN

SER

6

ILE

ARG

HIS

ASN

LEU

SER

LEU

ASN

ARG

TYR

7

PHE

ILE

LYS

VAL

PRO

ARG

SER

GLN

GLU

8

PRO

GLY

LYS

GLY

SER

PHE

TRP

ARG

ILE

ASP

9

PRO

ALA

SER

GLU

SER

LYS

LEU

ILE

GLU

GLN

10

ALA

PHE

ARG

LYS

ARG

PRO

ARG

Samples:

sample_1: Interleukin enhancer binding factor, [U-13C; U-15N], 2.5 mM

sample_2: Interleukin enhancer binding factor, [U-15N], 2.5 mM

sample_3: Interleukin enhancer binding factor 2.5 mM

Cond_set_1: pH: 6.0; temperature: 300 K; ionic strength: 0.25 M

Experiments:

Name	Sample	Sample state	Sample conditions
HNCA	not available	not available	not available
HN(CO)CA	not available	not available	not available
HNCACB	not available	not available	not available
CBCA(CO)NH	not available	not available	not available
HBHANH	not available	not available	not available
HBHA(CO)NH	not available	not available	not available
HCCH-TOCSY	not available	not available	not available
HCCH-COSY	not available	not available	not available
1H-15N-TOCSY-HSQC	not available	not available	not available
1H-15N-NOESY-HSQC	not available	not available	not available
2D NOESY	not available	not available	not available
2D TOCSY	not available	not available	not available
2D COSY	not available	not available	not available

Software:

No software information available

NMR spectrometers:

Bruker Avance 600 MHz

PDB	1JXS 2C6Y
DBJ	BAE29561
EMBL	CAA43200 CAG00839
GB	AAB02820 AAB02821 AAH46369 AAI12950 AAI52768
PIR	B42827
REF	NP_001074401 NP_001100545 NP_001135634 NP_004505 XP_001114082
SP	Q01167 Q3UCQ1 Q7ZX03
AlphaFold	Q01167 Q3UCQ1 Q7ZX03