BMRB Entry 34138

Title:
NMR structure of an EphA2-Sam fragment
Deposition date:
2017-05-12
Original release date:
2017-12-13
Authors:
Mercurio, F.; Leone, M.
Citation:

Citation: Mercurio, F.; Di Natale, C.; Pirone, L.; Iannitti, R.; Marasco, D.; Pedone, E.; Palumbo, R.; Leone, M.. "The Sam-Sam interaction between Ship2 and the EphA2 receptor: design and analysis of peptide inhibitors"  Sci. Rep. 7, 17474-17474 (2017).
PubMed: 29234063

Assembly members:

Assembly members:
entity_1, polymer, 27 residues, 2887.45 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: XKRIGVRLPGHQKRIAYSLL GLKDQVX

Data sets:
Data typeCount
1H chemical shifts202

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1entity_11

Entities:

Entity 1, entity_1 27 residues - 2887.45 Da.

1   ACELYSARGILEGLYVALARGLEUPROGLY
2   HISGLNLYSARGILEALATYRSERLEULEU
3   GLYLEULYSASPGLNVALNH2

Samples:

sample_1: Peptide fragment of EphA2-Sam 830 uM

sample_conditions_1: pH: 3.5; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1not availablesample_conditions_1
2D 1H-1H NOESYsample_1not availablesample_conditions_1
2D DQF-COSYsample_1not availablesample_conditions_1

Software:

CYANA v2.1, Guntert, Mumenthaler and Wuthrich - refinement

VNMRJ, Varian - processing

XEASY, Bartels et al. - chemical shift assignment

NMR spectrometers:

  • Varian INOVA 600 MHz