BMRB Entry 25670

Name: Solution Structure of Enterocin HF, an Antilisterial Bacteriocin Produced by Enterococcus faecium M3K31
Published: 2015-11-23

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PDB ID: 2n4k
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR25670
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of Enterocin HF, an Antilisterial Bacteriocin Produced by Enterococcus faecium M3K31

Deposition date:

2015-06-21

Original release date:

2015-11-23

Authors:

Arbulu, Sara; Lohans, Christopher; Cintas, Luis; Herranz, Carmen; van Belkum, Marco; Vederas, John; Hernandez, Pablo

Citation:

Citation: Arbulu, Sara; Lohans, Christopher; Cintas, Luis; Herranz, Carmen; van Belkum, Marco; Vederas, John; Hernandez, Pablo. "Solution Structure of Enterocin HF, a Highly Active Antilisterial Bacteriocin Produced by Enterococcus faecium M3K31" J. Agric. Food Chem. 63, 10689-10695 (2015).
PubMed: 26585399

Assembly members:

Assembly members:
entity, polymer, 43 residues, 4336.942 Da.

Natural source:

Natural source: Common Name: firmicutes Taxonomy ID: 1352 Superkingdom: Bacteria Kingdom: not available Genus/species: Enterococcus faecium

Experimental source:

Experimental source: Production method: purified from the natural source Host organism: Enterococcus faecium Vector: Not applicable

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: KYYGNGVSCNKKGCSVDWGK AIGIIGNNAAANLTTGGKAG WKG

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
1H chemical shifts	241

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	entity	1

Entities:

Entity 1, entity 43 residues - 4336.942 Da.

1

LYS

TYR

GLY

ASN

GLY

VAL

SER

CYS

ASN

2

LYS

GLY

CYS

SER

VAL

ASP

TRP

GLY

LYS

3

ALA

ILE

GLY

ILE

GLY

ASN

ALA

4

ALA

ASN

LEU

THR

GLY

LYS

ALA

GLY

5

TRP

LYS

GLY

Samples:

sample_1: entity 0.76 mM; TFE, d2-TFE, 50%; DSS 0.01%; H2O 50%

sample_conditions_1: pressure: 1 atm; temperature: 273 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1

Software:

CYANA v2.1, Guntert, Mumenthaler and Wuthrich - structure solution

NMR spectrometers:

Varian VNMRS 700 MHz