BMRB Entry 18854

Title:
1H,15N and 13C backbone chemical shifts of Human Halo S100A6 C3S
Deposition date:
2012-11-23
Original release date:
2014-02-14
Authors:
Gupta, Arun; Yu, Chin
Citation:

Citation: Gupta, Arun; Mohan, Sepuru; Chin, Yu. "1H, 13C and 15N backbone and side chain resonance assignments of human halo S100A1."  Biomol. NMR Assignments 6, 213-215 (2012).
PubMed: 22311340

Assembly members:

Assembly members:
Human_S100A6_C3S, polymer, 90 residues, 10163.8 Da.

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET(20b)+

Entity Sequences (FASTA):

Data sets:
Data typeCount
13C chemical shifts194
15N chemical shifts83
1H chemical shifts83

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Human S100A6 C3S1

Entities:

Entity 1, Human S100A6 C3S 90 residues - 10163.8 Da.

1   METALASERPROLEUASPGLNALAILEGLY
2   LEULEUVALALAILEPHEHISLYSTYRSER
3   GLYARGGLUGLYASPLYSHISTHRLEUSER
4   LYSLYSGLULEULYSGLULEUILEGLNLYS
5   GLULEUTHRILEGLYSERLYSLEUGLNASP
6   ALAGLUILEALAARGLEUMETGLUASPLEU
7   ASPARGASNLYSASPGLNGLUVALASNPHE
8   GLNGLUTYRVALTHRPHELEUGLYALALEU
9   ALALEUILETYRASNGLUALALEULYSGLY

Samples:

sample_1: Human S100A6 C3S, [U-100% 13C; U-100% 15N], 1 – 1.5 mM; TRIS 20 mM; Calcium chloride 10 mM; sodium azide 0.01%; H2O 90%; D2O 10%

sample_conditions_1: ionic strength: 0 M; pH: 7.0; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
3D HNCAsample_1isotropicsample_conditions_1
3D HN(CO)CAsample_1isotropicsample_conditions_1
3D CBCA(CO)NHsample_1isotropicsample_conditions_1
3D HNCACBsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1
3D HCACOsample_1isotropicsample_conditions_1

Software:

VNMRJ v2.3, Varian - collection, processing

SPARKY, Goddard - chemical shift assignment, data analysis, peak picking

NMR spectrometers:

  • Varian INOVA 700 MHz

Related Database Links:

BMRB 18868
PDB
DBJ BAG35024 BAG74211
GB AAA35886 AAA51905 AAA51906 AAH01431 AAH09017
REF NP_001248728 NP_055439 XP_002760026 XP_002810202 XP_003259360
SP P06703
AlphaFold P06703

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks