BMRB Entry 16233

Name: 1H, 13C, 15N Chemical Shift Assignments for Eimeria tenella microneme protein 3 mar1a domain
Published: 2009-05-20

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PDB ID: 2lbo
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16233
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C, 15N Chemical Shift Assignments for Eimeria tenella microneme protein 3 mar1a domain

Deposition date:

2009-03-30

Original release date:

2009-05-20

Authors:

Lai, Livia; Matthews, Stephen; Simpson, Pete

Citation:

Citation: Lai, Livia; Simpson, Pete; Bumstead, Janine; Tomley, Fiona; Matthews, Stephen. "Complete NMR assignments for the second microneme adhesive repeat (MAR) domain from Eimeria tenella microneme protein EtMIC3" Biomol. NMR Assign. 3, 175-177 (2009).
PubMed: 19888684

Assembly members:

Assembly members:
mar1a, polymer, 123 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Eimeria tenella Taxonomy ID: 5802 Superkingdom: Eukaryota Kingdom: not available Genus/species: Eimeria tenella

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET32 Xa/LIC

Entity Sequences (FASTA):

Entity Sequences (FASTA):
mar1a: APTLQEALDRKCAQFGKESC NSGLASYCGAAIYARYDKGN SSQQTKEWRCYIEKELDFSK SGDGCVDDCGSMTSCRGSVS GPSTSHLTRPSELQAVIDSD KSNYCTDKSEQQPSQATPPP EIP

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	481
15N chemical shifts	121
1H chemical shifts	676

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	mar1a	1

Entities:

Entity 1, mar1a 123 residues - Formula weight is not available

1

ALA

PRO

THR

LEU

GLN

GLU

ALA

LEU

ASP

ARG

2

LYS

CYS

ALA

GLN

PHE

GLY

LYS

GLU

SER

CYS

3

ASN

SER

GLY

LEU

ALA

SER

TYR

CYS

GLY

ALA

4

ALA

ILE

TYR

ALA

ARG

TYR

ASP

LYS

GLY

ASN

5

SER

GLN

THR

LYS

GLU

TRP

ARG

CYS

6

TYR

ILE

GLU

LYS

GLU

LEU

ASP

PHE

SER

LYS

7

SER

GLY

ASP

GLY

CYS

VAL

ASP

CYS

GLY

8

SER

MET

THR

SER

CYS

ARG

GLY

SER

VAL

SER

9

GLY

PRO

SER

THR

SER

HIS

LEU

THR

ARG

PRO

10

SER

GLU

LEU

GLN

ALA

VAL

ILE

ASP

SER

ASP

11

LYS

SER

ASN

TYR

CYS

THR

ASP

LYS

SER

GLU

12

GLN

PRO

SER

GLN

ALA

THR

PRO

13

GLU

ILE

PRO

Samples:

mar1a_H2O: mar1a, [U-13C; U-15N], 0.5 mM; H2O 90%; D2O 10%; sodium phosphate 20 mM; sodium chloride 50 mM

mar1a_D2O: mar1a, [U-13C; U-15N], 0.5 mM; D2O 100%; sodium phosphate 20 mM; sodium chloride 50 mM

sample_conditions_1: pH: 6; pressure: 1 atm; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	mar1a_H2O	isotropic	sample_conditions_1
2D 1H-13C HSQC	mar1a_H2O	isotropic	sample_conditions_1
3D HNCACB	mar1a_H2O	isotropic	sample_conditions_1
3D CBCA(CO)NH	mar1a_H2O	isotropic	sample_conditions_1
3D HN(CO)CA	mar1a_H2O	isotropic	sample_conditions_1
3D HNCO	mar1a_H2O	isotropic	sample_conditions_1
3D HBHA(CO)NH	mar1a_H2O	isotropic	sample_conditions_1
3D HCCH-TOCSY	mar1a_D2O	isotropic	sample_conditions_1
3D H(CCO)NH	mar1a_H2O	isotropic	sample_conditions_1
3D 1H-15N NOESY	mar1a_H2O	isotropic	sample_conditions_1
3D 1H-13C NOESY	mar1a_D2O	isotropic	sample_conditions_1

Software:

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMRView, Johnson, One Moon Scientific - chemical shift assignment, data analysis, peak picking

NMR spectrometers:

Bruker DRX 500 MHz
Bruker Avance 800 MHz