BMRB Entry 7291

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PDB ID: 2npl
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7291
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR Assignment and Secondary Structure of Coxsackievirus and Adenovirus receptor Domain

Deposition date:

2006-09-07

Original release date:

2007-04-26

Authors:

Jiang, Shaokai; Caffrey, Michael

Citation:

Citation: Jiang, Shaokai; Caffrey, Michael. "Solution structure of the coxsackievirus and adenovirus receptor domain 2" Protein Sci. 16, 539-542 (2007).
PubMed: 17322536

Assembly members:

Assembly members:
Coxsackievirus and Adenovirus receptor, polymer, 96 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapien

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Coxsackievirus and Adenovirus receptor: GSSGARCYVDGSEEIGSDFK IKCEPKEGSLPLQYEWQKLS DSQKMPTSWLAEMTSSVISV KNASSEYSGTYSCTVRNRVG SDQCLLRLNVVPPSNK

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
13C chemical shifts	338
15N chemical shifts	83
1H chemical shifts	574

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	CAR-d2	1

Entities:

Entity 1, CAR-d2 96 residues - Formula weight is not available

1

GLY

SER

GLY

ALA

ARG

CYS

TYR

VAL

ASP

2

GLY

SER

GLU

ILE

GLY

SER

ASP

PHE

LYS

3

ILE

LYS

CYS

GLU

PRO

LYS

GLU

GLY

SER

LEU

4

PRO

LEU

GLN

TYR

GLU

TRP

GLN

LYS

LEU

SER

5

ASP

SER

GLN

LYS

MET

PRO

THR

SER

TRP

LEU

6

ALA

GLU

MET

THR

SER

VAL

ILE

SER

VAL

7

LYS

ASN

ALA

SER

GLU

TYR

SER

GLY

THR

8

TYR

SER

CYS

THR

VAL

ARG

ASN

ARG

VAL

GLY

9

SER

ASP

GLN

CYS

LEU

ARG

LEU

ASN

VAL

10

VAL

PRO

SER

ASN

LYS

Samples:

sample_1: Coxsackievirus and Adenovirus receptor mM

cond_1: pH: 6.0; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H-15N HSQC	not available	not available	not available
HNCA	not available	not available	not available
HNCOCA	not available	not available	not available
HNCO	not available	not available	not available
HNCACB	not available	not available	not available
CBCACONH	not available	not available	not available
HCCH-TOCSY	not available	not available	not available
15N-HSQC-TOCSY	not available	not available	not available
15N-HSQC-NOESY	not available	not available	not available

Software:

NMRPipe -

NMR spectrometers:

Bruker DRX 600 MHz
Bruker Avance 800 MHz

PDB	2NPL
DBJ	BAG36305
EMBL	CAA68868 CAH92396
GB	AAC51234 AAD31772 AAF05908 AAF24344 AAG01088
REF	NP_001127547 NP_001193992 NP_001193995 NP_001329 XP_001156087
SP	P78310 Q5R764
AlphaFold	P78310 Q5R764