BMRB Entry 7121

Title:
Solution Structure of UPF0301 protein HD_1794
Deposition date:
2006-05-18
Original release date:
2007-11-21
Authors:
Zhang, Q.; Liu, G.; Shastry, R.; Jiang, M.; Cunningham, K.; Ma, L.; Xiao, R.; Acton, T.; Montelione, G.; Szyperski, T.
Citation:

Citation: Zhang, Q.; Liu, G.; Shastry, R.; Jiang, M.; Cunningham, K.; Ma, L.; Xiao, R.; Acton, T.; Montelione, G.; Szyperski, T.. "Solution Structure of UPF0301 protein HD_1794"  .

Assembly members:

Assembly members:
UPF0301 protein HD_1794, polymer, 188 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Haemophilus ducreyi   Taxonomy ID: 730   Superkingdom: Eubacteria   Kingdom: not available   Genus/species: Haemophilus ducreyi

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Data sets:
Data typeCount
13C chemical shifts564
15N chemical shifts156
1H chemical shifts1156

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1UPF0301 protein HD_17941

Entities:

Entity 1, UPF0301 protein HD_1794 188 residues - Formula weight is not available

1   METPHEGLYASNLEUGLNGLYLYSPHEILE
2   ILEALATHRPROGLUMETASPASPGLUTYR
3   PHEASPARGTHRVALILETYRILECYSGLU
4   HISASNASPASNGLYTHRILEGLYVALILE
5   ILEASNTHRPROTHRASPLEUSERVALLEU
6   GLULEULEUTHRARGMETASPPHEGLNMET
7   ALALYSPROARGILETYRTHRGLNASPGLN
8   METVALLEUASNGLYGLYPROVALASNGLN
9   ASPARGGLYPHEILEVALHISSERLYSTHR
10   ASPHISGLUPHETHRHISSERTYRLYSVAL
11   THRASPASPILETHRLEUTHRTHRSERGLY
12   ASPVALLEUASPSERPHEGLYTHRGLNTHR
13   ALAPROGLULYSPHEILEVALCYSLEUGLY
14   CYSSERTHRTRPLYSPROHISGLNLEUGLU
15   GLNGLUILEALAGLNASNTYRTRPLEULEU
16   SERGLUALAASNASNGLNTHRLEUPHEGLU
17   THRSERTYRLEUASPARGTRPVALGLUALA
18   ASNGLUMETLEUGLYILESERGLYILELEU
19   ALAPROALAGLYARGALALEUGLU

Samples:

sample_1: UPF0301 protein HD_1794 mM; MES 50 mM; DTT 10 mM; Arginine 50 mM; NaN3 0.02%; H2O 95%; D2O 5%

sample_cond_1: pH: 6.0; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
GFT (4,3)D HNNCABCAsample_1not availablesample_cond_1
GFT (4,3)D CABCA(CO)NHNsample_1not availablesample_cond_1
GFT (4,3)D HABCAB(CO)NHNsample_1not availablesample_cond_1
GFT (4,3)D HCCHsample_1not availablesample_cond_1
SIMULTANEOUS HETERONUCLEAR RESOLVED [1H,1H]-NOESYsample_1not availablesample_cond_1

Software:

DYANA v1.5 - structure solution

CYANA v2.1 - structure solution

NMRPipe v2.3 - processing

CNS v1.1 - refinement

XEASY v1.3 - data analysis

UBNMR v1.0 - data analysis

AutoStruct v2.0.0 - data analysis

NMR spectrometers:

  • Varian INOVA 750 MHz

Related Database Links:

PDB
GB AAP96545
REF NP_874156 WP_010945574
SP Q7VKS7
AlphaFold Q7VKS7

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks