BMRB Entry 7065
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR7065
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Chi, S.-W.; Kim, J.-S.; Kim, D.-H.; Lee, S.-H.; Park, Y.-H.; Han, K.-H.. "Solution structure and membrane interaction mode of an antimicrobial peptide gaegurin 4" Biochem. Biophys. Res. Commun. 352, 592-597 (2007).
PubMed: 17141187
Assembly members:
gaegurin 4, polymer, 37 residues, Formula weight is not available
Natural source: Common Name: Rana rugosa Taxonomy ID: 8410 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Rana rugosa
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
gaegurin 4: GILDTLKQFAKGVGKDLVKG
AAQGVLSTVSCKLAKTC
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 273 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Gaegurin-4 | 1 |
Entities:
Entity 1, Gaegurin-4 37 residues - Formula weight is not available
| 1 | GLY | ILE | LEU | ASP | THR | LEU | LYS | GLN | PHE | ALA | ||||
| 2 | LYS | GLY | VAL | GLY | LYS | ASP | LEU | VAL | LYS | GLY | ||||
| 3 | ALA | ALA | GLN | GLY | VAL | LEU | SER | THR | VAL | SER | ||||
| 4 | CYS | LYS | LEU | ALA | LYS | THR | CYS |
Samples:
sample_1: gaegurin 4 mM
sample_cond_1: pH: 4; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D NOESY | not available | not available | not available |
| 2D TOCSY | not available | not available | not available |
| 2D DQF-COSY | not available | not available | not available |
Software:
VNMR v6.1B - collection
FELIX v98.0 - processing
DISCOVER v2.98 - refinement
NMR spectrometers:
- Varian INOVA 600 MHz