BMRB Entry 10084

Name: Nuclear move domain of nuclear distribution gene C homolog
Published: 2008-08-14

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PDB ID: 1wfi
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10084
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Nuclear move domain of nuclear distribution gene C homolog

Deposition date:

2007-01-24

Original release date:

2008-08-14

Authors:

Nagashima, T.; Hayashi, F.; Yokoyama, S.

Citation:

Citation: Nagashima, T.; Hayashi, F.; Yokoyama, S.. "Nuclear move domain of nuclear distribution gene C homolog" .

Assembly members:

Assembly members:
Nuclear move domain, polymer, 131 residues, Formula weight is not available

Natural source:

Natural source: Common Name: mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P030908-69

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Nuclear move domain: GSSGSSGPNYRWTQTLAELD LAVPFRVSFRLKGKDVVVDI QRRHLRVGLKGQPPVVDGEL YNEVKVEESSWLIEDGKVVT VHLEKINKMEWWNRLVTSDP EINTKKINPENSKLSDLDSE TRSMVSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	589
15N chemical shifts	145
1H chemical shifts	946

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	nuclear distribution gene C homolog	1

Entities:

Entity 1, nuclear distribution gene C homolog 131 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

PRO

ASN

TYR

2

ARG

TRP

THR

GLN

THR

LEU

ALA

GLU

LEU

ASP

3

LEU

ALA

VAL

PRO

PHE

ARG

VAL

SER

PHE

ARG

4

LEU

LYS

GLY

LYS

ASP

VAL

ASP

ILE

5

GLN

ARG

HIS

LEU

ARG

VAL

GLY

LEU

LYS

6

GLY

GLN

PRO

VAL

ASP

GLY

GLU

LEU

7

TYR

ASN

GLU

VAL

LYS

VAL

GLU

SER

8

TRP

LEU

ILE

GLU

ASP

GLY

LYS

VAL

THR

9

VAL

HIS

LEU

GLU

LYS

ILE

ASN

LYS

MET

GLU

10

TRP

ASN

ARG

LEU

VAL

THR

SER

ASP

PRO

11

GLU

ILE

ASN

THR

LYS

ILE

ASN

PRO

GLU

12

ASN

SER

LYS

LEU

SER

ASP

LEU

ASP

SER

GLU

13

THR

ARG

SER

MET

VAL

SER

GLY

PRO

SER

14

GLY

Samples:

sample_1: Nuclear move domain, [U-13C; U-15N], 1.08 mM; d-NaOAc 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 4.5; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	not available	condition_1
3D 15N-separated NOESY	sample_1	not available	condition_1

Software:

VNMR v6.1C, Varian - collection

NMRPipe v20020425, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.8992, Kobayashi, N. - data analysis

CYANA v1.0.7, Guntert, P. - refinement, structure solution

NMR spectrometers:

Varian INOVA 900 MHz
Varian INOVA 800 MHz

PDB	1WFI
GB	EDL32783